Here is a list of people who teach bioinformatics courses and their websites.
Asia
Ben-Gurion University, IsraelDaniel Fischer (CS)
City Univ of Hong Kong, China
Lusheng Wang (CS)
University of Haifa, Israel
Alexander Bolshoy (BIO)
Hebrew University, Israel
Michal Linial (Bio)
Nathan Linial (CS)
Nir Friedman (CS)
National Taiwan University, Taiwan
Kun-Mao Chao (CS)
National University of Singapore, Singapore
Louxin Zhang (MATH)
National Yang-Ming University, Taiwan
Chuan-Hsiung Chang (Bio)
Technion, Israel
Dan Geiger (CS)
Ron Pinter (CS)
Zohar Yakhini (CS)
Tel Aviv University, Israel
Benny Chor (CS)
Haim Wolfson (CS)
Ron Shamir (CS)
Univ of Canterbury, New Zealand
Mike Steel (Math)
Univ of Tokyo, Japan
Miyano Satoru (CS)
Tatsuya Akutsu (CS)
Europe
European Bioinformatics InstituteAlvis Brazma (CS)
Freie University Berlin, Germany
Knut Reinert (CS)
German Cancer Research Center, Germany
Martin Vingron (Bio)
King's College London, England
Maxime Crochemore (CS)
Ludwig-Maximilians University, Germany
Ralf Zimmer (CS)
Lund University, Germany
Andrzej Lingas (CS)
Max-Planck Institute for Informatics Saarbrucken, Germany
Hans-Peter Lenhof (CS)
Thomas Lengauer (CS)
Royal Institute of Technology Stockholm, Sweden
Jens Lagergren (CS)
Technical Univ of Denmark, Denmark
Soren Brunak (Bio)
Steen Knudsen (CS)
Anders Krogh (CS)
Technical University of Munich, Germany
Ernst Mayr (CS)
Tuebingen University, Germany
Daniel Huson (CS)
Oliver Kohlbacher (CS)
University of Bergen, Norway
Inge Jonassen (CS)
Univ of Bielefeld, Germany
Andreas Dress (Math)
Jens Stoye (CS)
Univ of Gottingen, Germany
Burkhard Morgenstern (CS)
Univ of Jena, Germany
Rolf Backofen (CS)
Univ of Padua, Italy
Giuseppe Lancia (CS)
North America
Arizona State University, USAAndrzej Czygrinow (Math)
Boston College, USA
Peter Clote (CS)
Boston University, USA
Gary Benson (CS)
Simon Kasif (CS)
Temple Smith (BENG)
Brown University, USA
Franco Preparata (CS)
Carnegie Mellon University, USA
Dannie Durand (CS)
Ravi Ravi (CS)
Robert Murphy (Bio)
Russell Schwartz (Bio)
Ziv Bar-Joseph (CS)
City Univ of NY, Queens College, USA
Mingzhou Song (CS)
Cold Spring Harbor Lab, USA
Lincoln Stein (CS)
Colorado State, USA
Richard Davis (Math)
Columbia University, USA
Andrey Rhzetsky (Bio)
Christina Leslie (CS)
Cornell University, USA
Andy Clark (Bio)
Golan Yona (CS)
Ron Elber (CS)
Uri Keich (CS)
Dartmouth University, USA
Bruce Donald (CS)
Davidson College, USA
Laurie Heyer (Math)
Duke University, USA
Alexander Hartemik (CS)
Herbert Edelsbrunner (CS)
Mike West (Math)
Pankaj Agarwal (CS)
Florida International University, USA
Giri Narasimhan (CS)
Georgia State University, USA
Alexanda Zelikovsky (CS)
Georgia Tech, USA
Mark Borodovsky (Bio)
Harvard University, USA
George Church (Bio)
Jun Liu (Math)
Wing-Hung Wong (Math)
Indiana University, USA
Sun Kim (CS)
Iowa State Univ, USA
David Fernandez-Baca (CS)
Oliver Eulenstein (CS)
Volker Brendel (Bio)
Xiaoqiu Huang (CS)
Johns Hopkins University, USA
Jonathan Pevsner (BIO)
Massachusetts Institute of Technology, USA
Bonnie Berger (Math)
Chris Burge (Bio)
David Gifford (CS)
Ross Lippert (Math)
Tommi Jaakola (CS)
McGill University, Canada
David Bryant (CS)
Mathieu Blanchette (CS)
Michael Hallett (CS)
Robert Kearney (CS)
Memorial University of Newfoundland, Canada
Todd Wareham (CS)
New York University, USA
Bud Mishra (CS)
North Carolina State University, USA
Steffen Heber (CS)
Pennsylvania State University, USA
Arthur Lesk (Bio)
Webb Miller (CS)
Princeton University, USA
Mona Singh (CS)
Purdue University, USA
A. Apostolico (CS)
Rensselaer Polytechnic Institute, USA
Chip Lawrence (Math)
Michael Zuker (Math)
Chris Bystroff (BIO)
Rice University, USA
Lydia Kavraki (CS)
Rockefeller University, USA
Terry Gaasterland (Bio)
Rutgers University, USA
Martin Farach-Colton (CS)
Simon Fraser University, Canada
Cenk Sahinalp (CS)
Stanford University, USA
Douglas Brutlag (Bio)
Jean-Claude Latombe (CS)
Michael Levitt (Bio)
Russ Altman (Bio, CS)
Serafim Batzoglou (CS)
State Univ of NY Stony Brook, USA
Steve Skiena (CS)
Texas A&M University, USA
Nancy Amato (CS)
Sing-Hoi Sze (CS)
The Institute for Genomic Research, USA
Steven Salzberg (CS)
Univ of Arizona, USA
David Mount (Bio)
John Kececioglu (CS)
Univ of British Columbia, Canada
Anne Condon (CS)
Holger Hoos (CS)
Univ of California Berkeley, USA
Gene Myers (CS)
Kimmen Sjolander (BENG)
Lior Pachter (Math)
Mike Eisen (Bio)
Richard Karp (CS)
Roded Sharan (CS)
Terry Speed (Math)
Haiyan Huang (Math)
Univ of California Davis, USA
Dan Gusfield (CS)
Vladimir Filikov (CS)
Univ of California Irvine, USA
Eric Mjolsness (CS)
Pierre Baldi (CS)
Richard Lathrop (CS)
Dennis Kibler (CS)
Univ of California Los Angeles, USA
Chris Lee (Bio)
Univ of California Riverside, USA
Stefano Lonardi (CS)
Tao Jiang (CS)
Univ of California San Diego, USA
Glenn Tesler (Math)
Michael Gribskov (Bio)
Pavel Pevzner (CS)
Philip Bourne (Pharm)
Shankar Subramaniam (BENG)
Terry Hwa (Phys)
Trey Ideker (BENG)
Vineet Bafna (CS)
Univ of California Santa Cruz, USA
David Haussler (CS)
Kevin Karplus (CS)
Todd Lowe (CS)
Univ of Colorado Health Science Center, USA
Larry Hunter (Bio, CS, Pharm)
Univ of Connecticut, USA
Ion Mandoiu (CS)
Univ of Delaware, USA
Li Liao (CS)
University of Florida, USA
Tamer Kahveci (CS)
Univ of Georgia, USA
Liming Cai (CS)
Ying Xu (BIO)
Univ of Idaho, USA
James Foster (CS)
Univ of Massachusetts, USA
David Kulp (CS)
Univ of Michigan, USA
David States (Bio)
Gordon Crippen (Bio)
Univ of Montreal, Canada
Miklos Csuros (CS)
Nadia El-Mabrouk (CS)
Univ of New Mexico, USA
Bernard Moret (CS)
University of North Carolina, USA
Jack Snoeyink (CS)
Univ of Pennsylvania, USA
Lyle Ungar (CS)
Sridhar Hannenhalli (Bio)
Susan Davidson (CS)
Warren Ewens (Bio)
Univ of Quebec, Canada
Cedric Chauve (CS)
Anne Bergeron (MATH)
Univ of Southern California, USA
Michael Waterman (Bio, CS, Math)
Simon Tavare (Bio)
Tim Chen (Bio)
Univ of Texas Austin, USA
Tandy Warnow (CS)
Univ of Virginia, USA
Bill Pearson (Bio)
Univ of Washington, USA
David Baker (Bio)
Martin Tompa (CS)
Philip Green (CS)
Walter Ruzzo (CS)
William Noble (CS)
Joseph Felsenstein (BIO)
Univ of Waterloo, Canada
Dan Brown (CS)
Ming Li (CS)
Univ of Western Ontario, Canada
Bin Ma (CS)
Virginia Tech, USA
Cynthia Gibas (Bio)
Washington Univ in St. Louis, USA
Gary Stormo (Bio)
Jeremy Buhler (CS)
Michael Brent (CS)
Sean Eddy (Bio)
Yale University, USA
Mark Gerstein (Bio)